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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… summer sea ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce … yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s … Reports. Print copies will be available the annual JGI Genomics of Energy & Environment Meeting in San Francisco …
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Benjamin Cole
… interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … multi-omics datasets for algae that can be used for large-scale production of biofuels and bioproducts. At NREL, Luke …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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JGI Welcomes New UEC Members
… affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who has been an … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To …
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Identifying the Microbial Cleanup Crew at a Superfund Site
PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified … understand the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of … 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one long … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in … 20 UC Merced students have contributed to the research of 13 JGI scientists through the JGI-UC Merced Genomics …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … is currently a PI for both CSP New Investigator and large-scale CSP projects. Wilbanks has served on review panels for the JGI’s Functional Genomics CSP and the JGI-EMSL FICUS programs and brings …
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