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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …
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Integrating Experimentation with Data
…                   General attendees: $500     Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular …
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2025 Progress Report
… Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
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VEGA Symposium
… Bird rates available now General & Berkeley Lab Attendee – $250 Students & Postdocs – $200 Regular Rates (begin September 19, 2026) General & … – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the challenges in understanding wild … as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer … article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Doubling Down on Known Protein Families
… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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Accelerating Metagenomics Discoveries with Deep Learning
… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … usable for conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … DE-SC0012460 (to M.J.H.). Work conducted by the DOE Joint Genome Institute is supported by the Office of Science of …
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JGI User Executive Committee Expands
… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … different environments. He’s been involved in several plant genome projects through the Community Science Program. As a … encourage more plant proposals and provide feedback on pangenome tool development. Maurice is a fungal evolutionary …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … changing salinity of the environment. ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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