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… computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates … of IMG/VR to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …

Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …

Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …

… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … metabolism. … PhD in Chemistry, Johns Hopkins University (2003) MS in Chemistry, Johns Hopkins University (2000) BS in … (1996) … List available on Google Scholar … Education … Publications …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

… bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … training fellowship in biomolecular and optical devices 1997: NSF Interdisciplinary research experience for … Google Scholar. … Education … Awards and Honors … Selected Publications …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …