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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… less than 5% of land on Earth, peatlands store approximately one-third of the world’s soil carbon. The process to … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Mike Sneddon
… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific Computing at … library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published …
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Danielle Goudeau
… combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… All Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, … Hoppy Hour @ Calicraft Brewing, Walnut Creek Where:  Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek … Road company) Hosted by Nigel Mouncey, Director, DOE Joint Genome Institute Read a synthesis from the panel discussion  …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … . For example, green algae represent the largest group of primary producers generating organic compounds through …
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Virus Discoveries that Keep Getting Bigger
… Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of giant viruses came primarily from sampling an environment, then co-culturing … virions (700 nm in diameter) to much smaller virions (120 nm in diameter). Across the phylum  Nucleocytoviricota , …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … discovery and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni … production of biofuels and renewable chemicals, developing genome engineering tools for non-model organisms, modulating …
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Marine Microbe Contains Multitudes
… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts (metagenomes, …
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Rex Malmstrom
… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards … S, Huang Y, Price JC, Mao J-H, et al. Mass spectrometry imaging for in situ kinetic histochemistry. Sci Rep. 2013;3: …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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New Research Sheds Light on Diversity in the Deep Sea
… Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …
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