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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … of algae, and sampling of the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, …
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Partnerships Development Team
… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to learn more.   … SPPs enable …
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Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation
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JGI Early Career Researchers Featured in mSystems Special Issue
… recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research … nature. In the last few years, mapping the planet’s viral diversity has advanced drastically, aided by genome assembly …
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A One-Stop Shop for Analyzing Algal Genomes
… with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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A One-Stop Shop for Analyzing Algal Genomes
… with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … with names — but not doors — and robots handle a bunch of benchwork. …
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JGI announces 2024 New Investigator portfolio
… is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean …
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Uncovering Novel Genomes from Earth’s Microbiomes
… have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and …
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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the …
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