Results
… and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … reveals changing protistan ecology of a temperate dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of … Fellowship (2011-2015) DAAD (“German Academic Exchange Service”) scholarship (2008-2009) VDI (“Association of German …
Learn more
… environmental or biological samples (like cell media or lake water) without doing a metabolite extraction? Or are … 10.1021/acschembio.8b01107. Epub 2019 Apr 4. Q: Any advice on normalizing metabolomic data from a whole microbial … transcriptome analysis and 8 replicates for metabolomics. Why is this? A: We did a pilot experiment with the JGI to …
Learn more
… it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, … components of hardy cell walls. It’s the cellulose and hemicellulose that eventually yield fuels, and removing lignin … Centers, the Joint BioEnergy Institute and the Great Lakes Bioenergy Research Center. O’Malley is also affiliated …
Learn more
… about 200,000 fungal species have been named. Among those sequenced, roughly half of all genes have completely unknown … Program and co-author of the paper. The JGI is a DOE Office of Science User Facility located at Lawrence Berkeley … for prediction of fungal lifestyles based on genome sequences.” The Fungal Knowledge Gap The fungal kingdom …
Learn more
… community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical … as needed. UEC membership, qualifications, and terms of service Any investigator who has been an active user of the JGI …
Learn more
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley … to adapt to changing environments. It also sheds light on why the rapid injection of mutations in a particular gene … all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is the head …
Learn more
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
Learn more
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … group. “Turns out that despite all the genomes we've sequenced, we've only scratched the surface.” The study, …
Learn more
… our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned … Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley … scientific approaches to these challenges. DOE’s Office of Science is the largest supporter of basic research in …
Learn more
… (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass genome using samples … at three DOE Bioenergy Research Centers (BRCs)—the Great Lakes Bioenergy Research Center (GLBRC) , the Center for … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
Learn more

