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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… Jill Banfield approached Doudna with repeated genetic sequences (already known as CRISPR) that came up in her … not operate alone. Viruses infect them, and that can have a great impact on these algal blooms. So Vardi and his group study one specific alga,  Emiliania huxleyi  (sequenced by the JGI), and the virus that infects it,  …
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Data Ecosystem
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Leo Baumgart
… and Viola Willemsen. "Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate … characterization of the physiological responses to salt stress in S cenedesmus obliquus UTEX393." …
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Frederik Schulz
… and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … reveals changing protistan ecology of a temperate dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … at three DOE Bioenergy Research Centers (BRCs)—the  Great Lakes Bioenergy Research Center (GLBRC) , the  Center … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome … metagenomes can I submit?  How deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), … count toward the 1Tb cap. PacBio metagenomes are currently sequenced without pooling, which yields ~ 180 Gb of data per …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they published the sequences of these three chromosomes. These sequences …
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User Executive Committee Charter
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