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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …
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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science … with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Frederik Schulz
… Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research … and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and …
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A Bioinformatician's Guide to Metagenomics
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Behind the Paper: Hot Springs Metagenomics
… Adapting the graduate research experience amidst a global pandemic   …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and … Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … (LIMS) system. He previously led the NGS Software team and metagenomic data platform at Zymergen, a synthetic biology …
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