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… workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups … the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for … robust methodologies for analyzing and understanding viral genomes and their interactions with microbial hosts. The …

… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining …

… (Neocallimastix californiae) on sorghum, switchgrass and poplar, then monitored changes to the plants’ lignocellulose …

… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …

… move toward characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal …

In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … Soghomonian share what it was like to take on one of these genomes.  …

… to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … Lab … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. …