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Axel Visel
… for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … J, Niyogi KK, Wei CL (2015).  Lineage-specific chromatin signatures reveal a regulator of lipid metabolism in … Metagenomic discovery of biomass-degrading genes and genomes from cow rumen . Science 331, 463-7. Visel A , Zhu …
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Finding the Fermenters
… browser that allows other researchers to study the genomes and predict the metabolic abilities of these … GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. They also … the phenotypic records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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Improving the Cacao Genome and Phytozome
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … method called Multiple Displacement Amplification, and most genomes that were acquired through it were usually only …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… and those previously grown for the DOE candidate feedstock poplar. “You’re collecting natural diversity and you’re … and phenotypic performance,” he said. Both switchgrass and poplar are JGI Flagship Plants. Reaping Long-Term Investment … test genetic hypotheses in species with large and complex genomes,” said Lovell. “However, new sequencing technologies …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … Schmutz and his team assembled and annotated the genomes at HudsonAlpha. Sujan Mamidi and Adam Healey, two of …
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Forming Scientific Connections and Building Community
… of a multiplex genomic integration system for the selection of genes essential for specialized carbon … Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great meeting …
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. … fields. A public repository of 52,515 microbial draft genomes generated from environmental samples around the …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… of these enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, … evolved separately for billions of years have some common signatures of muli-substrate specificity. However, different …
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The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
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