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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Prepublication data sharing
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Clustering Categorical Data
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DOE Metrics
… capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download PDF] Q4 – Report on a new computational … Q2 is due to planned upgrade of the Laboratory Information Management System (LIMS) and temporary shut down of the …
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A call for caution in the biological interpretation of viral auxiliary metabolic genes
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HaploCharmer: a Snakemake workflow for read-scale haplotype calling adapted to polyploids
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Sequencing Submission Requirements for DNA Synthesis
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How To Use Our Systems
… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata and its curation in our core processes. This allows us …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … engineer on the early KBase team at Lawrence Berkeley National Laboratory. Mike earned his PhD in Computational … in bacteria. Proceedings of the National Academy of Sciences of the United States of America 109(3), 805–810 …
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Marine Microbe Contains Multitudes
… reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In … many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four …
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Massie S. Ballon
… collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping … portfolio spans a wide range of topics beyond translating science, including crafting technical reports, developing … content, and writing feature profiles. She is one of the Biosciences Area representatives to Berkeley Lab’s Stewardship …
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2022 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The …
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