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Statement on the Use of Genomics Data
… of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 … current data policies for gaining a better understanding of how changes may affect data-producing users and other users. …
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Cataloging the Microbes that Manage the Health of River Systems
… 90% of the watersheds in the continental United States. They also provided multiple access points to the information. The team harnessed a community-science … that the microbes in these bodies of water help regulate. However, the microbes also interact with compounds like …
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A Sorghum Pangenome Opens More Doors to Discovery
… into drought tolerance, biomass production and more — however, a single reference genome shows only one slice of … well as how structural changes connect to specific traits. They also saw long-studied traits come into clearer view.  … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . … pathways could lead to the discovery of genes that could be used for multiple biotechnological applications. These …
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Transcriptomic and genomic effects of gamma-radiation exposure on strains of the black yeast Exophiala dermatitidis evolved to display increased ionizing radiation resistance
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … researchers, Igor Grigoriev and Asaf Salamov, and together, they embarked on a quest to better understand the factors … machine learning tools. “This was very exciting to see how Rhondene not only embraced the research question and …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… that could help crop breeders and researchers predict how crops and model organisms may evolve.  Determining the … This figure outlines the general methodology he and Rokhsar came up with: Until they came up with this new method, Session mentioned that …
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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JGI on the 2021 Highly Cited Researchers List
… to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics for … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Symposium series. The online seminars foster discussion on how to best capture and characterize uncultivated viruses, …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent … genomic data at a computer; a few had the opportunity to spend time out in the field, work at the lab bench, and … engineering and math (STEM) fields. This summer, they worked with Zhong Wang’s and Tanja Woyke’s groups, …
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Who We Are
… (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team … user facility located at Lawrence Berkeley National Laboratory ( Berkeley Lab ), and part of the Biosciences Area. The …
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