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… symbionts in sulfur-rich mangrove sediments not far from his lab when he first encountered the bacteria. “When I … a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab also used a labeling …

… DNeasy PowerSoil Kits and sent the samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed … able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …

… data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, … and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into …

… biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and cultivated microbes, … This work was supported by the Australian Research Council (DP150100244) and the …

… Do metabolic pathways from engineered yeasts still work in cell-free environments? … format for chemical synthesis in the absence of cell growth by isolating the soluble components of lysed cells. By separating the production of enzymes (during … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… discovery and maximize the benefit to society. Inspired by the Human Genome Project (HGP), and building upon the … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 … to be moved to private status. This will remove records from search indexes and BLAST databases until such time that …

… to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the first … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … with Cole and Serrano to collect and analyze the single nuclei and spatial transcriptomics data this work …