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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … a Genome Insider podcast minisode.) Since the JGI’s early sequencing of C. reinhardtii became available, data mined by … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked … newest 5-Year Strategic Plan: Beyond Basepairs — A Vision for Integrative and Collaborative Genome Science , the … our near- and long-term goals. And, by the way, as far as sequencing goes, the JGI’s next petabase will likely be …
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Four Researchers Join JGI User Executive Committee
… State University, Jonathan Eisen of the University of California, Davis, and Michael Köpke of Lanzatech are the latest … technologies, and toward a secure energy portfolio for DOE priorities.  Bik is an associate professor at the … membership in the UEC, Bik aims to serve as an advocate for early-career scientists and unconventional sample types …
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Enlarging Windows into Understanding Gene Functions
… array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan … an innovative way to rapidly capture the binding location for most transcription factors in a species,” O’Malley said. …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying … portion of the Arkansas River that’s just a little west of Fort Collins, near a city called Leadville. ED:   And, uh, …
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A User-Centered Approach to Accessing JGI Data
… the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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2024 Progress Report
… also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department … to realize our new vision to, “ Lead genomic innovation for a sustainable bioeconomy ” — as articulated in our new … processed 13,700 metabolomics samples With our users, 247 publications were published   …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … marine natural products, getting into the ocean and looking for molecules from the very beginning of the field. I … Moore on the Salinispora project,  so this is pretty comfortable territory for us, and I’m grateful to be working …
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JGI Scientists Pen Genome Watch Articles
… Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … their expertise in environmental genomics by writing for the column Genome Watch in  Nature Reviews Microbiology … 27, is about engineering plants and their microbiomes for more sustainable agriculture and was written by JGI …
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Mapping the Earth’s Hidden Fungal Kingdom
… in perspective, the genus Aspergillus has been evolving for 82 million years, making it nearly 30 times older than … and Algal Science Program and JGI users have been at the forefront of tackling this enormous challenge, assembling … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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