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… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … Data that passes through a kingdom portal (assemblies + annotations) For IMG & Mycocosm: Data that is associated … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). …

… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … 10 to the negative 9th. Picomolar, 10 to the negative 12th. DAN: Yeah. So very-- BETSY PARKINSON: Very, very-- … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 mycorrhizal species include 29 …

… sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … algal genomes using Chlamy as a reference for functional annotation, including Chromochloris zofingiensis , which has …

… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … the microbiology of watershed systems, they utilized over 160 river water samples collected through WHONDRS, a … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … to the second episode of the Natural Prodcast. This is part 2 of our “primer” episode, so if you ended up here somehow … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …