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Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …

Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley … of many transcription factors to better understand how nutrients are acquired and carbon is metabolized in …

Harnessing BER-funded data resources, researchers built an … community brings together the data resources enabled by the DOE Biological and Environmental Research (BER) … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from … and improved.  Semi-manual. Assembly, annotation ( IMG ), methylation analysis 131/176 Microbial Single Particle Sort …

… 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to … biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry.  You can learn more …

… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … warmer waters, including the tropics, tend to be dominated by prokaryotes (microorganisms without a defined nucleus). … medium. In reality, it’s not — there is variation of nutrients, temperatures, and other physico-chemical …

To expand access to integrated data, improve tools and infrastructure …

… 7,000 genes with other organisms (a third of those shared by both humans and flowering plants). Its genome also … interesting observation in Chlamy. Most plants require the nutrient copper for photosynthesis; Chlamy does not. When … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …

A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as … to the atmosphere. Peat bogs also serve the ecosystem by minimizing flood risks and filtering water. Peat formed …

… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, … and their host microbes impact the regulation of global nutrient cycles. The JGI’s latest strategic plan (download a …

In honor of the JGI's 25th anniversary in 2022, we have … in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … into how the multiple chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the … kind of underground stem, the rhizome, that stores nutrients from one growing season to the next. By studying …