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Testing for the Genomic Footprint of Conflict Between Life Stages in an Angiosperm and Moss Species
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … been associated with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics Researchers Building upon these …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… surfaces of plants and their roles in plant health and environmental processes. The Science In a recent Microbiome paper … surface of plants, is a comparatively understudied area of forest ecosystems as past studies have mainly focused on … the JGI here . Bennett is applying the same experiment to a new environment. She is currently working on her thesis to …
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring … the United States Government nor the University of California nor any of their employees, makes any warranty, …
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: …
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Geology and climate influence rhizobiome composition of the phenotypically diverse tropical tree Tabebuia heterophylla
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Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … address some of the most pressing challenges of our time. For more information, please visit  …
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