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DAS Tool for Genome Reconstruction from Metagenomes
… and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture … environmental samples of very complex microbial communities into complete or near-complete genomes to aid …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … and Development after his research interests shifted from condensed matter physics to computational biology, … is focused on understanding the origin, evolution, and diversity of plants and animals by combining computational …
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The initial soil microbiota impacts the potential for lignocellulose degradation during soil solarization
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Probiotics to minimize the disruption of faecal microbiota in healthy subjects undergoing antibiotic therapy
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Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range
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Genome Sequence of “Candidatus Frankia datiscae” Dg1, the Uncultured Microsymbiont from Nitrogen-Fixing Root Nodules of the Dicot Datisca glomerata
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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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Igor Grigoriev
… University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes …
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Game On: High School Students Drive Everglades Metagenomics Study
… decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the … They chose this location because much is unknown about the diversity of organisms (taxonomy) and particularly those in … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Chloroflexi CL500-11 Populations That Predominate Deep-Lake Hypolimnion Bacterioplankton Rely on Nitrogen-Rich Dissolved Organic Matter Metabolism and C1 Compound Oxidation
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A data analysis and coordination center for the human microbiome project
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Enzymatic carbon–fluorine bond cleavage by human gut microbes
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