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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Metagenomes, Metatranscriptomes, and Metagenome-Assembled Genomes from Chesapeake and Delaware Bay (USA) Water Samples
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … of Application Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … Biology article highlights how one microalga collected from water on the ice surface handles such fluctuations. P. … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Network Modeling of Complex Data Sets
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome …
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An analysis of codon bias in six red yeast species
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