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Krishna Palaniappan
… design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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Nikos Kyrpides
… analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and … focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for … al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell . S1097-2765 Schulz F, et al. 2020. Giant …
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IMG/M 4 version of the integrated metagenome comparative analysis system
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A perspective: Metatranscriptomics as a tool for the discovery of novel biocatalysts
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Streamlining the Design-to-Build Transition with Build-Optimization Software Tools
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Natural Prodcast Episode 2: The Primer, Part 2
… has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …
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Sequencing Submission Requirements for DNA Synthesis
GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… across southern Florida, they encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. … the microbes that play roles in the methane cycle. Their data report, which provides the only known reference … through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley Eloe-Fadrosh , who heads the  …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
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Identifying the Microbial Cleanup Crew at a Superfund Site
… , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome … the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… type-strain deposits. All of these genome sequences and the tools to compare them are available on the JGI’s Integrated … gene loss shape the BGC repertoire in most genomes. The BGC data will also soon be contained within the JGI’s Secondary … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems
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