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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million years … Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated … Change’ (SPP 2237), and grant 410739858 in the frame of the project CharMod to K.v.S., as well as RE 1697/16-1 (CharMod) …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley …
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Natural Prodcast Episode 3: The Primer, Part 3
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … we need people from outside of the JGI to come to us with projects that will help us actually drive this strategic …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … four genes, including one with no prior known function. The project’s success demonstrates how to sharpen the …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in … the primary author on this publication and drove the entire project, Visel explained. She continued working virtually … build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of …
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User Programs
Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial diversity is … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … has been no real analysis of protein families from metagenomes per se.”  Recently, other research teams have …
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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to … able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample …
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Scaling Up Existing Skill Sets
… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me … one that incorporates big data. A large part of my project this summer was utilizing a high performance cluster …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have … engagement activities under the umbrella of the SOD Blitz Project. In hopes of controlling the spread of the disease, … Science News of the Day: Stokstad E. Genetics. Genomes highlight plant pathogens’ powerful arsenal . …
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