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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … Bennetzen, JL & Schmutz, J et al. 2012. Reference genome sequence of the model plant Setaria. Nature Biotechnology …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program … the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … and Higher Education at Ensenada (CICESE) in her first microbial ecology paper in the journal PLoS One . “Puerto … a fishing town and we know little about its coastal microbial ecology. We also know little about where to …
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The Integrated Microbial Genome Resource of Analysis
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Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool
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Applying Viral Genomics Expertise to Understanding the Human Virome
… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to … Aside from being a key component of the marine food web base, they also feature in many nutrient cycles. Thus, …
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the …
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Sequencing crop genomes: approaches and applications
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Selection to sequence: opportunities in fungal genomics
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