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… Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …

… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial … hills, and it has legacy mining that goes back more than 100 years. And in particular, there’s an inflow from the …

… Innovative technology from this biomanufacturing collaboration is available for licensing. The Science In  Nature … The collaboration between the JGI and the Foundry on this project highlights an  ongoing partnership that combines the … Through a Laboratory-Directed Research and Development project supported by Berkeley Lab, JGI and Foundry …

… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and …

… The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

… of chromosomes (they are “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn … modern sugarcane cultivars are hybrids, each with more than 100 chromosomes; assembling a sugarcane genome is incredibly … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …

… never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us lemons, kumquats, limes, pomelos, mandarins, sweet oranges, and … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… Interns contributed to a number of projects, from refining lab … Asaf Salamov, Igor Grigoriev Project:  Training new JGI genomes with Tiberius Brandon Imstepf Mentor: Brian Bushnell …

… associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated …

… these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome … to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on …

… Team develops a computational pipeline to sift and characterize RNA virus sequences.  … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into …

… work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …