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… kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program …

… their careers in science. Hear more about what they learned from working with their JGI mentors, what challenges they … they look forward to taking back to school.  The interns from this cohort and their respective JGI mentors are: Ruoxi … over the past couple years is a little bit different from what I did during the summer. But ultimately I think …

… ripples through the trees in his backyard. Originally from northern California and one of the first students to … Recently, Lawrence, in collaboration with researchers from ORNL, Lawrence Berkeley National Laboratory, the … the results. Based on the type of questions and feedback from his JGI audiences, he began to understand what worked …

… characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

… as a mutualist, where both species of organism benefit from association, but was predicted to have evolved from a … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as … Nature Communications , the team found that the fungus is highly dependent on the Burkholderia endobacteria to …

… it’s possible that fungal communities — or enzymes from fungal communities — could pave the way for many … But there’s opportunities for borrowing and porting parts from nature — enzymes, transporters, pathways — into …

… the third is determining the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. … experimentally verified in S. coelicolor . With results from the research, RIViT-seq data have increased the …

… in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without amplification. …

… other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s open application process …

… When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel … performance, and then applied it to environmental samples from the Great Boiling Spring Geothermal Field in Nevada. To … the researchers also hooked and were able to reconstruct a high-quality draft co-assembled genome for a new genus level …