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… et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. … ASM’s USFCC/J. Roger Porter Award (2018) Honorary Doctorate from the Aristotle University of Thessaloniki (2017) The van …

… is led by a team of highly experienced investigators from institutions including the University of Maryland and … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse metagenomics samples. …

… Genomes from uncultivated bacteria offers clues to ancestral … lineages Margulisbacteria and Saganbacteria that diverged from the bacterial tree before Cyanobacteria and its … Saganbacteria. At the same time, working with researchers from the Bigelow Laboratory for Ocean Sciences, Microbial …

… user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) …

… And so we’re looking at the overall greenhouse gas impacts from all of our operations,” said Brie Fulton, program … Reaching that goal will mean slashing direct emissions from energy, natural gas and electricity, as well as … and performing services,” Fulton said. These emissions come from the whole lifecycle of materials used — from their …

… genomic information using minute quantities of DNA derived from individual environmental cells. The proof of principle … team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… a Research Scientist position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her … al. 2011. Metagenomic discovery of biomass-degrading genes from cow rumen. Science 331, 463-467. Swan et al. 2011. …

… and other microorganisms that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected 40 samples from five oceanic regions to better understand how these …

… result of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of … also serve as a mentor for another SCGSR awardee, Ian Rambo from Brett Baker’s lab at the University of Texas-Austin. … an existing JGI Community Science Program proposal from the Baker lab to study microbial communities from …

… kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program …

… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI … two interns returned to re-engage with their mentors from the previous year and continue working on their … Cross Species Integration of Single Cell Transcriptomes …

… host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t … Nikos Kyrpides at the JGI led a team that combed datasets from around the world, finding over 125,000 partial and … The new database was called IMG/VR. It featured samples from different ecosystems all over the world, including …