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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … Google Scholar … Education … Awards and Service … Selected Publications …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … said. Informed by other community-driven standards from the Genomic Standards Consortium, Wilhelm and Simpson assembled … input materials, with eight or nine different teams then performing analyses that they will all compare. Thanks to …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar … and microbiomes during interactions? Is it reliable performing an untargeted metabolomic analysis directly from the …
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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to land. Key … three strains of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research …
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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Zhong Wang
… new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … metagenome binning software … Education … Selected Publications … Software …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
Phytozome workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and …
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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health …
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Robert Bowers
Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Tomas Tyml
… traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within … microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary history of life. …
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W. Berkeley Kauffman
… user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic engineering. …
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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines … novel flow cytometry protocols for targeted recovery of specific microbes. …
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