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Rex Malmstrom
… a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … activated cell sorting and non-standard molecular protocols.  Finally, his team utilizes new technologies, … reactions, increase throughput, and enable processing of samples that would not be possible with traditional …
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A Collaboration to Improve Plant Genome Annotations Across Species
… of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … Faculty Investigator Jeremy Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this … understand the gene function and add additional biological information. As I’ve said earlier, 16 to 56 percent of plant …
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Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina.
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Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica.
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … These tools give researchers a way to access much more information about fungi in these environments. “Now with …
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Operating Expenses
… Office of Biological and Environmental Research (BER), a program within the DOE Office of Science. …
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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Mapping the Earth’s Hidden Fungal Kingdom
… Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of tackling this enormous … genome representative, while others remain completely unsampled. This creates a bottleneck: Without genetic … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National …
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2025 NeLLi Symposium
… an ongoing challenge. This symposium series will provide an overview of the bacterial, archaeal and microeukaryote … Schulz , New Lineages of Life Lead Tanja Woyke , Microbial Program Gitta Szabo , User Project Coordination Rekha Seshadri, Functional … NeLLi 2025 Event Overview …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search for and find 13 … build immunity to viruses. To do so, they compared samples collected from an aquifer in 2012 and 2018 against a …
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Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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