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… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … episode of the JGI  Natural Prodcast . Using this massive dataset, Nayfach clustered the MAGs into 18,000 candidate … on Metagenome Bins to learn more.) One group mined the dataset for novel secondary metabolites of secondary …

… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … out the onerous SIP sample processing. Generating these datasets opens up the possibility of new insights across …

… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … model, researchers also generated the first transcriptomic dataset of sexual reproduction in early fungi and discovered … of the fungal kingdom, generating the first transcriptomic dataset of sexual reproduction in early fungi to find sex …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV identified a … 44,652 complete or near-complete viral genomes across both datasets, separating these from the vast majority of other …

… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only … of the microbial community. The study’s publicly available dataset gives researchers the opportunity to study how DGRs …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re listening to the second episode of the Natural Prodcast. This is part 2 of our “primer” …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two main branches of fungi); another is a …

… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in plant roots. They play … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal …

… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …