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… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … classification framework that combines and builds on two standard techniques for identifying viruses and plasmids. …

… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: …

… Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her …

… 25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … The JGI aims to create pipelines, tools and other standardized data resources that the global research … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the …

… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … a team of researchers has been working on improving methods for isolating and characterizing entire microbial genomes from sequences generated from environmental samples. The work …

… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … operated under contract no. DE-AC02-05CH11231. The bioinformatics work conducted at the University of Pretoria was …

… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …

… by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …

… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, …

… See below for examples of successful Letters of Intent to our … Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared …