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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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The leucine-rich repeats in allelic barley MLA immune receptors define specificity towards sequence-unrelated powdery mildew avirulence effectors with a predicted common RNase-like fold
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … and Environment (iSEE) and the Carl R. Woese Institute for Genomic Biology (IGB), and it will include 17 partner … the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a … helped fungi, bacteria and viruses survive. With this metagenomic analysis, it was possible to identify specific …
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David Goodstein
With a background in experimental and computational surface … Genome Project, he began developing larger comparative genomic systems as the JGI’s eukaryote research efforts … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … tweet us @JGI, or to me @danudwary. If you want to record and send us a question that we might play on air, …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint … expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial … on November 6-7 focused on improving cultivation and genomic coverage. Experts in cultivation and environmental …
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