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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Viral Genomics Group
… abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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JGI@25: The Little Alga That Could
… sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … Her lab has sequenced four additional green algal genomes using Chlamy as a reference for functional annotation, … within Chlamy, meaning that its RNA can produce up to four proteins, which has far-reaching implications. “This is …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both the DNA and … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were …
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Partners
Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to datasets, …
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Prepublication data sharing
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Clustering Categorical Data
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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Thermoacidophilic proteins for biofuel production
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Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria
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Metagenomic Sequencing of Two Salton Sea Microbiomes
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … days and that are widely used by many, many scientists.”  Using samples of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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