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Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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From Competition to Cooperation
… to white rot fungi. Additionally, some of the saprotrophic genes found in the mycorrhizal species, such as nutrient … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and … starting with the first mycorrhizal genome sequence generated by the JGI more than a decade ago. Having these …
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A Community Resource for Secondary Metabolite Researchers
… secondary metabolites are produced by groups of genes known as biosynthetic gene clusters (BGCs.) As … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Webinar: MycoCosm Tutorial
… in the future? For other things than assembly size or gene count? (In the interactive tree) A: Sajeet is … in metagenomes? A: Search in metagenomes is available from another JGI portal, IMG:  https://img.jgi.doe.gov 7.  … While are still working on finalizing the tree and related publication the tree is still in development and not …
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… — nitrogenases — other enzymatic machinery harvests sulfur from gaseous organic sulfur compounds in the atmosphere.  … an enzyme system that was previously only understood at a genetic level. Functional and structural experiments showed … DNA Synthesis program and a co-author on the paper. First a pathway, then a purified enzyme (and a surprise) This recent …
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Game On: High School Students Drive Everglades Metagenomics Study
… sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … of genes involved in environmentally significant metabolic pathways related to methane production, nitrogen fixation, … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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High quality draft genome sequence of Olivibacter sitiensis type strain (AW-6T), a diphenol degrader with genes involved in the catechol pathway
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