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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… may have been important in early Earth conditions. The Science Through a combination of sequencing tools and … applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … and his colleagues to name the archaeal lineage for the planet Mars. To help determine where Marsarchaeota might …
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Nikos Kyrpides
… National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …
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Mapping the Earth’s Hidden Fungal Kingdom
… (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … Berkeley National Laboratory (Berkeley Lab). “These data can also be used for machine learning and artificial …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, researchers have … retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG suite is a …
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A Social Science Experience
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Offerings & Capabilities
… access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA Sequencing , DNA … phenotypic, metabolomic, imaging, sensor, and other data produced at scales amenable to statistical analysis. To …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… thoughts, and explorations that has led to groundbreaking science and opportunities to speak on a national level. A … of sorts at the Lab. “This project represents part of our long term efforts to contribute towards a diverse … Senior Assistant Dean and CFO of the School of Natural Sciences Ernie Costello beamed as he spoke of what the …
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Exabiome: Advancing Microbial Science through Exascale Computing
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … stable, heavy isotopes, SIP allows researchers to go beyond understanding which microbes are present in a sample, to … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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All Events
… is represented at conferences year round; find out where our researchers will be presenting next. Learn about …
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Operating Expenses
… Research (BER), a program within the DOE Office of Science. …
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