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Better Crops With a Pointillist Approach to Plant Genomics
… from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And …
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Fungus Fuels Tree Growth
… associations with endophytes — a group whose effects on plants are still not well understood — scientists can better fine-tune their engineering efforts of both plants and root microbiomes to grow energy crops more … noting they increased expression of genes involved in signaling of gibberellin, one of the best-known plant growth …
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Special Initiatives & Programs
… located in geographically distinct areas and use different plants both for laboratory research and for improving … center focuses on creating robust high-yielding feedstock plants, using advanced genetic technology to accelerate the … East Lansing, Michigan. This center is studying a range of plants and, in addition to exploring plant fiber breakdown, …
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Webinar: PhycoCosm Tutorial
… analysis (assemble, annotate, work on initial analysis) and share data in PhycoCosm. For genomes not sequenced by JGI, … Only algal genomes in PhycoCosm? A: PhycoCosm is devoted to algae (photosynthetic eukaryotes not including plants), so populated by algal genomes thus defined. We also …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… of fundamental aspects of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris … history of a pivotal plant as well as the evolution of seed plants, the fern’s distant cousin. Ceratopteris richardii, … species representing all major evolutionary lineages in the land plant tree of life. Ultimately, the resulting …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … interest in the bioenergy and biotechnology potential of algae, and sampling of the length and breadth of algal … sequence information to BER funded activities of plant systems. We will describe how to apply for a project with …
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Genome of the Cyanobacterium Microcoleus vaginatusFGP-2, a Photosynthetic Ecosystem Engineer of Arid Land Soil Biocrusts Worldwide
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Leo Baumgart
… of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei sequencing … conservation in flowering plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. … Hasty. "A microfluidic platform for long-term monitoring of algae in a dynamic environment." ACS synthetic biology 5, …
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Ian Blaby
… and UCLA he has worked with a wide range of eukaryotic algae, archaea and bacteria with a view to developing a … genome editing by coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a … in plant science . 19: 10, 672-680. 2014 Blaby, et. al., Systems-level analysis of nitrogen starvation–induced …
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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization
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Virus Discoveries that Keep Getting Bigger
… nutrient cycling and carbon storage. For example, the marine algae  Emiliania huxleyi, a microeukaryote, forms large … of giant viruses in metagenomes. This has been useful in marine environments, where it has become clear that viruses …
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How Microbes Can Protect Plants in Drier Straits
… Science Program, to use microbiome science to help make plants more resilient to drought. …
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