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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … Roux are part of the first cohort to receive Early Career Development awards as part of the Laboratory-Directed …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … which could then be converted into sustainable biofuels . For its importance to the DOE mission, switchgrass is among … P. virgatum on Phytozome … Plant Dataset …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. … U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Genome-scale model development and genomic sequencing of the oleaginous clade Lipomyces
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is … hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers … aims to enable the JGI user community to participate in the development and biotechnology applications of various …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to … to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … ’s genes to be required for growth. By contrast, an initial screen using an unvetted library (with both active …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … and that’s a good niche market for soybean.”  Upon its initial release in 2009, the soybean genome sequence … Glycine max on Phytozome … 3 P. pachyrhizi genomes on MycoCosm …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US … ecosystems. One application for the information is the development of river health diagnostic systems to monitor … work was partially supported by awards from US Department of Energy (DOE) Office of Science, Office of Biological and …
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High‐resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a … mining, all the way from sequencing to functional characterization, and a project like this — an exciting … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … A step closer to a sustainable method of producing ethylene …
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