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Fungal & Algal Program
Learn more
Natural Prodcast Episode 1: The Primer, Part 1
… see things that maybe aren’t real, and so it’s thought that based on historical records and weather recordings of the …
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You Can Move, But You Can’t Hide
… called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. … to identify both viruses and plasmids; one is marker gene-based, and the second is a neural network approach. The tool … data and access the geNomad tool to conduct their research. Designed to reduce the effects of taxonomic representation …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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An Automated Tool for Assessing Virus Data Quality
… the blind men who encounter an elephant for the first time. Based on the single body part each blind man touches – a … well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV identified a total of …
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A Community Resource for Secondary Metabolite Researchers
… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First and foremost, it is …
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Natural Prodcast Episode 4: Nancy Keller
… got my start.   DAN: A lot of the natural products field is based on, you know, in bacterial investigations. You’ve …
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Finding the Fermenters
… phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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JGI@25: The Little Alga That Could
… sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched … organism as a model system. “People name genes based on similarity to the Chlamy genes,” Merchant …
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Eelgrass Proves to Be Much Younger Than We Thought
… of Alaska and Norway, as well as California and Mexico. Based on the study, it would seem that once conditions … like this, researchers would normally craft a genetic clock based on its divergence with a  different species. However, …
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2025 NeLLi Symposium
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… [Bowers], was super helpful and I, I just have so much more confidence and I can say that I’m an app developer and …
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