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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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Game On: High School Students Drive Everglades Metagenomics Study
… attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. … The undertaking took shovels, trucks — and more than a decade.  …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference … and contribute to the bioeconomy. Summary In the past decade, many breeding tools for eucalyptus have relied on … Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science of … to Z.-H.C.). B.A.A. and D.W.S. acknowledge funding for this project from the Ambrose Monell Foundation. …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … data carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF grant “Nextree” …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … source of both protein and oil was also the largest plant project completed by the JGI. It has since been cited more …
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SPRUCE-ing Up Science
… one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef … yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, …
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Webinar: MycoCosm Tutorial
… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … While are still working on finalizing the tree and related publication the tree is still in development and not … genomes and those external genomes that enable JGI CSP projects – please first contact us at [email protected] …
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