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… the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly … Otani H, Udwary DW, Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated … microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing …

Harnessing BER-funded data resources, researchers built an interactive and … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

… carbon despite global warming.  At ORNL, Lawrence brings a bioinformatics expertise, a combination of biology and … the inevitable questions about the study’s methods and analysis, Lawrence is spending time on the graphics that … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …

Across four forests, researchers have leveraged data from the 1000 … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular … novel microbial lineages, leading to a new appreciation for the extent of diversity. The phylogenetic and functional …

… fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted …

Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … de novo plant assembly and the post-genome computational analysis at HudsonAlpha. … Jeremy Schmutz is the Plant … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …

… datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” …