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The More the Merrier: Making the Case for Plant Pan-genomes
In their base state, they are diploids with two genome copies, one from each parent. Having three or more genome … multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while … the polyploid  B. hybridum formed more than once, and these events took place a million years apart: the individual with …
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JGI@25: Stories from Intern Alumni
… help solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of …
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Emiley Eloe-Fadrosh
… and archaea. Nature Biotechnol. 35, 725-731. Paez-Espino D, et al. 2016. Uncovering Earth’s virome. Nature 536 , … NIH Early Career Investigator Travel Fellowship, 2013 and 2012 ZoBell Fellowship, Scripps Institution of Oceanography, … for major journals and funding agencies and philanthropic organizations including Nature, Nature Biotechnology, …
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FICUS Overview
… approval, project managers negotiate project specifics with PIs (including JGI scientists as needed), and the work plan …
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Toward More Efficient Artificial Photosynthesis
A team led by researchers at the Max Planck Institute (MPI) for Terrestrial Microbiology and the University of … was enabled in part through the Community Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of …
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JGI@25: From Life at the Extremes to Editing Genomes
… seeks other enzymes in the CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & … – meetings is here .) Working with the JGI, Banfield is a pioneer in metagenomic studies, recovering microbial genomes …
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Axel Visel
… chromatin signatures reveal a regulator of lipid metabolism in microalgae .  Nature Plants 1: 15107 Lupiáñez DG, Kraft K, Heinrich V, Krawitz P, Brancati F, … Rubin EM, Black BL, Bristow J, Pennacchio LA*, Visel A * (2012). Large-scale discovery of enhancers from human heart …
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Products
… profiling of non-polar (e.g. secondary metabolites, lipids, etc) metabolites using reverse phase chromatography … transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by …
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JGI announces 2024 Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that … to enhance understanding of gene and genome function. Tapping into these functions allows researchers to use them for … sequestration into sustainable biomaterials, and developing high-throughput methods to reveal metabolic pathways …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian … Reich, Taniya RoyChowdhury and Mar Schmidt; [bottom] Cody Spiegel, James Tan, Emma Timmins-Schiffman, Andressa M. … Vischi, Jennifer Wisecaver, Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each …
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Game On: High School Students Drive Everglades Metagenomics Study
Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida … in it because she credits her high school teacher with inspiring her to get into science and wanted to pay it forward. … Earth and Environmental Education (E4) community-building workshop at the  2019 Association for Environmental Studies …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
Systems Biology professor Carolin Frank reflected on the past decade and shared favorite memories in a panel … a new position as the Senior Manager, Machine Learning at Pilot Flying J. Nathaniel Brown was a 2022 graduate student …
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