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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … (Hear more from on Chlamy from Sabeeha Merchant in this episode of JGIotas, a Genome Insider podcast minisode.) …
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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Methane Cycling Microbial Community Characteristics: Comparing Natural, Actively Extracted, Restored and Unrestored Boreal Peatlands
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A Sorghum Pangenome Opens More Doors to Discovery
… researchers to harness the traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds … and bioenergy production. Together with resequencing of 1,984 cultivars and landraces, these data capture the … global crop trait discovery.  Nature (2026). doi:10.1038/s41586-026-10229-9   …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these … version of a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive …
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Mission
… U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale … in studies of complex biological and environmental systems. We optimize our service to the community through responsibly … Biological systems hold extraordinary potential to power innovation in energy, materials, and manufacturing. …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are … with a maternal  B. distachyon parent (D plastotype) some 1.4 million years ago (Mya), while the S plastotype was a …
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Robert Bowers
… Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This … and community ecology of microbes sampled from the natural environment. …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga … precise gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid … still able to reproduce asexually through mitosis. The alga naturally produces high amounts of oil and can grow with or …
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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