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Yasuo Yoshikuni
… microbe-microbe and plant-microbe interactions in various environments to improve crop yield, and developing a platform … technologies unlocking the potential of macroalgae as an environmentally sustainable and cost-effective biomass for … , 2023 Wu et al. Structural characterization of a soil viral auxiliary metabolic gene product - a functional …
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Charting Progress toward Professional Goals
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A Model System for Perennial Grasses
… a million years ago. The hallii variety thrives in desert environments, while the filipes variety is less drought tolerant and is found in river and coastal environments. The Impact The perennial grass switchgrass ( Panicum virgatum ) is a candidate bioenergy feedstock with a complex …
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Katherine Louie
… rich metabolite profiles from diverse biological and environmental samples in support of user science.  …
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Alabama A&M Interns Access An Abundance of Knowledge
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Taking Stock of the Known and Unknown Microbial Space
… the interactions between microbes, hosts, and their environments could be applied to multiple research areas … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team found that … Efforts to recover MAGs by extracting data directly from environmental samples over the years have significantly …
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A More Intuitive Phytozome Interface
… Crubella_v1.0 Mdomestica_v1.0 Fvesca_v1.1 Pvirgatum_v1.1 Zmays_6a Ahypochondriacus_v1.0.   Gene report … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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A Community Resource for Secondary Metabolite Researchers
… that allow the organisms to adapt to and control their environment. Many secondary metabolites are produced by groups … within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal contained biosynthetic gene clusters …
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JGI on the 2020 Highly Cited Researchers List
… quality reference genome sequence of green millet ( Setaria viridis ) in  Nature Biotechnology.  The work also led … publicly-available microbial draft genomes generated from environmental samples around the world. Much of the data had … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux are part of …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what … Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new … Department of Energy, Office of Science, Biological and Environmental Research, Early Career Research Program awarded …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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