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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the specialized software and …
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2025 Progress Report
… Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced … that “this makes forming hypotheses and the way we go about future biological research much clearer.” Newman asked the … the genome sequence for SARS-CoV-2 , back in January of 2020. His work has also yielded insights into the origin and …
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JGI@25: Using Team Science to Build Communities Around Data
… The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. … (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi …
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Fungus Fuels Tree Growth
… partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team … for the DOE. The work conducted by the DOE Joint Genome Institute, a DOE Office of Science User Facility, is …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. … ) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… exchanging ideas, forming collaborations, and charting the future of microbiome science. Organizers The EcoFAB 2025 …
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2025 NeLLi Symposium
… students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and … cultivating new bacteria and archaea revealed by a recent genome census . A key outcome will be a a compelling … Rock Canyon National Conservation Area This is an all-day (8:00am-3:00pm) field trip on Saturday, November 8 that …
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Training the Next Generation of Talent
… his summer research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user … RNA-Seq assembly. RNA-Seq is a technique for profiling the small fraction of a genome that contains transcribed … feedback from the participants to learn how to improve in future years. Knowing that we can establish an eight-week …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … bioeconomy. Researchers and farmers could improve future sugarcane varieties so that they can adapt to future …
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