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… developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download PDF] Q4 – Report on a new computational …

For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … carbon and nitrogen fixers in alpine and high latitude ecosystems, deciphering their internal molecular mechanisms can … variation in its progeny. The study’s transcriptomic data also identified many genes potentially important for …

… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … his team then linked those species-level observations with data on microalgal communities across different ocean … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … and participation — is especially important in microbial ecosystems. These communities harbor tens of thousands of … genome-resolved metagenomes and will be implementing new tools in KBase to tackle the bioinformatic challenges …

Open Green Genomes hits milestone with C. richardii The Science Fern … S.C.; grant 41571049 to Y. Wu); China Agricultural Research Systems (grant CARS-05 to S.C.); the Key R&D Program of … Monell Foundation. … Ceratopteris richardii on Phytozome Data portal … Datasets …

Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area …

… break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team has also been able to discover additional …

… periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, … cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes …