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The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline … roles in the global sulfur cycle. Copies are available online – click here to go download one from the archive of …

Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … Lab … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. …

… the field, work at the lab bench, and also do some computational analyses at their desks. As part of the DOE JGI’s … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; …

… chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will … Miscanthus breeding programs. The team also sequenced genomes of numerous wild Miscanthus lineages to better …

… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … used to clean up the toxic chemicals is commonly known as Enhanced Reductive Dechlorination (ERD.) It is dependent on … by continuing to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the …

Congratulations to the 2021 Highly Cited Researchers at the … of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an … EcoGenomics & Applications (VEGA) Symposium series. The online seminars foster discussion on how to best capture and …

… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … Metagenomic discovery of biomass-degrading genes and genomes from cow rumen . Science 331, 463-7. Visel A , Zhu …

… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … what has typically been associated with viruses, while the genomes of large viruses may be only 10 times larger. And …

The User Support Analysis group provides computational analysis for new technology development and JGI user … experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in … also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group also performs …

Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … flowering plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose …

Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those …