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User Support
… world-class science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope … of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … Facilitate data sharing with investigators through  JGI Genome Portals Coordinate data analysis tool tutorials, as …
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Metabolomics
… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of …
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Matt Blow
… on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … Free-Living Growth and during Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … these complex symbioses between organisms feeds into a better understanding of nutrient cycling across the planet. …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants.  Science, 2011; 332: …
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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