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Understanding Wildfire Recovery, Starting in Soil
… a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, … Collaborations for User Science (FICUS) initiative and used resources at the Environmental Molecular Sciences Laboratory … DE-AC05-76RL01830. Metagenomic and metatranscriptomic sequencing was performed at the University of Colorado …
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute … Berkeley, CA/ Sr. Compensation Analyst and Human Resources Partner, June 2017 –  present Sr. Compensation …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected …
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2024 Progress Report
… the community through responsibly managing our people and resources.     Director's Perspective Over the last year, … Revio. They enable increased capacities and faster sequencing, and at the same time help us manage costs. We have also scaled DNA-affinity purification sequencing (DAP-seq),  stable isotope probing (SIP) and …
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You Can Move, But You Can’t Hide
… Berkeley National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user facility at … DEAC05-76RL01830 to P.N.N.L.), and used computational resources from the Exascale Computing Project (17-SC-20-SC), …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… National Synchrotron Light Source II (NSLS-II). Leveraging resources from user facilities funded by the Biological and … done the synthesis, metagenome mining, all the way from sequencing to functional characterization, and a project … MarS has evolved as a safety switch, to conserve resources.  Despite its important role in this system, the …
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Uncovering Novel Genomes from Earth’s Microbiomes
… metabolites for multiple applications. Despite advances in sequencing technologies and computational methods in the … A New Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative … continue to do this kind of projects.” The work also used resources of the  National Energy Research Scientific …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that enable … Additional Resources …
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JGI Announces 2025 New Investigator Portfolio
… whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will investigate a diverse … such as metatranscriptomics and environmental DNA sequencing to explore microbial and plant interactions …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it can produce an … reference genome built off more than a decade of work; as sequencing technologies advanced, assembly and annotation of …
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… by DOE’s Bioenergy Research Centers, which initiated the sequencing of the switchgrass genome. DOE’s  Billion Ton … technologies have allowed us to build the necessary genome resources to directly test for genes involved in biomass … native perennial plants with these genetic and genomic resources, interweaved with this long longitudinal study …
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