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Computationally Classifying Fungal Lifestyles
… and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the data provided. In this proof of concept test, the team reported that the algorithm was over 95% successful at …
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The Chlamydomonas genome project: a decade on
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Genomic Standards Consortium Projects
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JGI-UC Merced Interns Share Their 2021 Experiences
… working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … foster a diverse future workforce in science. To learn more about each intern’s experience during their internship, … Making Big Data Metagenomic Clustering Scalable …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree … give researchers a way to access much more information about fungi in these environments. “Now with these new tools … the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The JGI …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single … Exploring the fascinating world of giant viruses, which challenge our understanding of viral complexity …
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Tour the IGB
… of each floor, click and drag to look around the space, use the graphic rings to move about the space, and your pointing device to zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive … trees are incorrect or need to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish … sets the trees are based upon? A: This is still work in progress as new genomes are being added. We do plan to …
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JGI Announces 2026 Functional Genomics Recipients
… Pictured from left: [Above] Hanin Alzubaidy, Markus Covert, Sheel C. Dodani, Kathryn Fixen, Jane Fudyma, … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI's biodesign and omics … these functions gives researchers the tools to build engineering applications in support of advancing the …
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Metabolomics
… profiles from diverse biological and environmental samples using advanced liquid chromatography mass spectrometry … soil, lake).  A wide range of metabolites are identified using LC-MS/MS methods optimized for specific types of … Find more details on the instrumentation we use and our methodology for metabolite analyses.  …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … than 130 implementation milestones to help track and drive progress toward the overarching goals and vision. The plan … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… scientists, the culmination of their work into a written report that is published in a scientific journal is the … ultimate achievement. To get to this point requires rigorous research, written skill, above all else, determination. … Grigoriev at the JGI strongly influenced her perspective about what it means to be a scientist. “To see how team …
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