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… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …

… The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to … Click to view a downloadable copy of the sponsor prospectus … Keynote Speakers Jim Collins Massachusetts Institute of Technology Kristala Prather Massachusetts Institute of …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …

… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … in genomics, including JGI, is not representative of the diversity in the population, especially here in California. … Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the …

… Ancient  Chloroflexota s ditched their flagella and other traits when … and pH levels vary wildly from spring to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … ) conducted by the U.S. Department of Energy Joint Genome Institute …

… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was … hydrothermal vents – and computationally identifying which sequences represent viruses that were present in the sample. …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning team at the Supercomputing …

… Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects of research questions Another intern summer has closed at … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes …

… for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … challenges in the sourcing, recovery, and utilization of critical minerals and materials. For accepted proposals, … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user …

… Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in …

… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI …