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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … that produce them. The Impact Secondary metabolites are microbial compounds produced in response to hardship or …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and … existing infrastructures and technologies, enabling these communities to become trainers for budding scientists and … SB was supported by the National Science Foundation Integrative Organismal Systems - Plant Biotic Interactions …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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JGI announces 2025 Functional Genomics awardees
… Kathleen Scott, Tiffany Taylor, Setsuko Wakao and Benjamin Woolston. ] Each year, the JGI accepts proposals for … crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into … for 2025.  Proposals are accepted year-round ; the next deadline is Jan. 29, 2026.  …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … hypothesizes the difference might not be due to repeated sequences, but rather the more accurate assembly of regions …
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A Powerful Technique to Study Microbes, Now Easier
… with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically … was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team …
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