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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the … of a soil viral auxiliary metabolic gene product - a functional chitosanase., Nature Communications , 2023 Zhao …
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The JGI Data Portal: Improving User Experience
… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … It includes several user-validated features and updated functionality, such as: The ability to select data by type …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … surface where algae grow. Armed with a better understanding of the alga’s stress resistance and ability to adapt to …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. Originally from northern California and one of the first students to participate in the DOE Joint Genome …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … Hu F, Regulski M, Blaby IK, Ware D, Blaby-Haas CE. (2024) Functional diversification within the heme-binding …
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David Goodstein
With a background in experimental and computational surface physics, Dr. … focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. …
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PhycoCosm Tutorial
Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be … uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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