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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … plants can’t run away, they’ve evolved these really tough cell wall materials that keep microbes — and the enzymes …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility located at Lawrence Berkeley … worked closely with both the Fungal & Algal Program and the Microbial Program over the past decade in gene regulatory …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … nearly 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed …
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New and Improved: Eucalyptus Reference is Now Accessible
… a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances compared to the 2014 Eucalyptus grandis reference genome that has been … South African team collected the plant tissues. DNA and RNA sequencing were conducted by the JGI, along with genome …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. Proposals are accepted year-round; the next review …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The … through the  Community Science Program , using long-read sequencing to assemble the repetitive areas of the complete … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that maize …
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JGI announces first round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … Below find a list of the first 10 researchers accepted for 2023. Proposals are accepted year-round; the next review …
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Webinar: Introducing the BioSANS capability
… Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play … Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome sequence of a …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … capability of morel mycelium to acquire carbon from lignocellulosic-abundant matters such as plant litter and to … assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying leaves and woods into the …
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The JGI Data Portal: Improving User Experience
… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of …
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